Just to give you some further information, here are the entries which were removed on Sept 5th when I removed remnants of Limewire in the same way. It seems that this is very similar to the issues with the reg cleaner both removing drive and folder entries and showing some strange characters in the backup that were not in the registry key. If it would help you, I could do a restore on these entries (after creating a system restore point lol) and try it again to see if it happens the same way.
I can't do a restore on the ZoneAlarm entries since I have since re-installed it and I don't know if it would restore the same ZoneAlarm configuration. I believe there could have been 2 versions of ZoneAlarm on my computer. I will be removing ZoneAlarm once again as it stands now so I will do a regular uninstall and see if it leaves remnants which I can remove with JV16 to see if the issue repeats.
Here are the LimeWire backup entries ...
jv16 PowerTools 2009
Data fields are: Key, Entry's name, Value
HKEY_CLASSES_ROOT\*\OpenWithList\Excel.exe\, @, ""
HKEY_CLASSES_ROOT\*\OpenWithList\IExplore.exe\, @, ""
HKEY_CLASSES_ROOT\*\OpenWithList\MSPaint.exe\, @, ""
HKEY_CLASSES_ROOT\*\OpenWithList\Notepad.exe\, {KEY}, {KEY}
HKEY_CLASSES_ROOT\*\OpenWithList\Winword.exe\, @, ""
HKEY_CLASSES_ROOT\*\OpenWithList\WordPad.exe\, @, ""
HKEY_CLASSES_ROOT\drive\shell\find\command\, @, "%SystemRoot%\\Explorer.exe"
HKEY_CLASSES_ROOT\folder\shell\explore\command\, @, "%SystemRoot%\\Explorer.exe /e,/idlist,%I,%L"
HKEY_CLASSES_ROOT\folder\shell\open\command\, @, "%SystemRoot%\\Explorer.exe /idlist,%I,%L"
HKEY_LOCAL_MACHINE\Software\LimeWire\, InstallDir, "C:\\Program Files\\LimeWire"